Workshop

Hands On Bioinformatics Workshop with PacBio

Closed In Person July 18, 2025

A hands-on workshop exploring PacBio sequencing technology through two specialized tracks — Human & Clinical and Non-Human genomics.

Agenda

  1. 1
    Session 1 – Human & Clinical Track: Variant Calling and Annotation
  2. 2
    Session 2 – Non-Human Track: Eukaryotic Genome Assembly and Metagenomics

Requirements

  • Open to anyone interested in PacBio technology
  • Must be registered for the SNBT x JMU 2025 event

What you'll learn

  • Variant calling and annotation for human/clinical data
  • Eukaryotic genome assembly and metagenomics workflows

Registration Fee

Per session: IDR 750,000 Complete (both sessions): IDR 1,200,000

Bonus

  • Free consultation to build your high-performance computer for multi-omics analysis
  • Special discount available for Revio Call grantees

Registration deadline: July 14, 2025

Application closed
Hands On Bioinformatics Workshop with PacBio poster

IGF Primers – Back to Basic

Closed In Person April 17 – May 9, 2025

A mini workshop series introducing the fundamentals of bioinformatics using the Data Carpentry curriculum. Hands-on sessions are held offline at the Biology Faculty Auditorium, UGM with a maximum of 20 participants for practical exercises.

Agenda

  1. 1
    Plenary Session: Talkshow "A Day in the Life of a Bioinformatician" Apr 17 · 13:00–16:00
  2. 2
    Hands-on Session 1: Intro to Command Line Apr 25 · 13:15–16:15
  3. 3
    Hands-on Session 2: Managing & Processing NGS Data May 2 · 13:15–16:15
  4. 4
    Hands-on Session 3: Data Analysis & Visualization with Python/R May 9 · 13:15–16:15

Requirements

  • Open to students and early-career researchers
  • Hands-on sessions limited to 20 participants
  • Plenary talk is free and open to all

What you'll learn

  • Command-line fundamentals with scripts, wildcards, and GitHub Copilot
  • NGS data management, QC with conda & EPI2ME
  • Statistical tabulation and publication-quality visualizations in Python/R

Registration Fee

Plenary session: Free Hands-on sessions: See registration form

Bonus

  • Certificate of completion for hands-on sessions

Registration deadline: See registration form

Application closed
IGF Primers – Back to Basic poster